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Good practices for organizing notes

Is there any efficient non-linear note-taking software?

What are some good writing tablets for taking notes that are heavy on math/physics?

How does making notes of what you read help you in research/teaching?

Software/App for electronic research notebooks

What is the equivalent of the laboratory notebook in the humanities?

Do professors frown upon students who don't take notes?

Tips for useful note-making when learning by oneself

How to annotate/summarize research papers for long-term retrieval?

How to read a textbook for distance learning coursework - do I need to work on fact recall, or is understanding enough?

How to manage theorist's "labbook"?

How to read and take notes on research papers

Note taking software: referencing text to searchable keywords

What kind of content should one avoid when publishing (math) notes online?

How to keep and organize a research journal/log/diary/notebook?